-
The phenotype profile for [an HSP fly gene](https://monarchinitiative.org/gene/NCBIGene:32133#phenotypes) has an inferred association with "writer's cramp"; however, the lack of any transparent basis …
-
- explain the nature of the problem you were trying to solve
- explain the information you needed (a tree, the alignments, information on how those were derived, etc...)
- what was actually linked t…
-
I found a paper (https://doi.org/10.1016/j.neuron.2023.08.005) that cites Dandiset 000458 (https://doi.org/10.48324/dandi.000458/0.230317.0039). When I went to the Dandiset landing page, I find that t…
-
`mvn dependency:analyze` reports many "Used undeclared dependencies" and "Unused declared dependencies".
Maybe this helps to resolve #35
-
I am trying to use your parser but there are some problems. My OS is Windows 10 and I did next steps:
First I try installation from the repo:
```
pip install git+git://github.com/titipata/pubmed_…
-
**Describe the bug**
Tags in the `` value cause:
```python-traceback
File ".../pubmed_oa_parser.py", line 153, in parse_pubmed_xml
journal = " ".join([j.text for j in journal_node])
TypeError…
ghost updated
3 months ago
-
**Describe the bug**
I am using pubmed parser to extract table information from xml files. The tests were performed with two papers: PMCID 535340, and 535341. Both papers have tables; PMC535340 has f…
-
_From @olgabot on June 18, 2014 5:58_
Hello there,
This is Olga Botvinnik and Mike Lovci (@mlovci), PhD students in Bioinformatics-type fields at UC-San Diego working on a biological data analysis pa…
-
**Describe the bug**
```
{'title': 'Discovery of PROTAC BCL-X',
'abstract': 'Anti-apoptotic protein BCL-XL plays a key role in tumorigenesis and cancer chemotherapy resistance, rendering it an att…
JIBSN updated
4 months ago
-
Hi all,
there are currently some issues with how annotations are stored in cobrapy.
[1] MIRIAM qualifiers are dropped
RDF annotations are triples of the form (subject - predicate - object), with…