-
Hi,
I have to confess that I have only used `Ratatosk` once, but I was just thinking about the option for "trimming". The program `GraphAligner` (https://github.com/maickrau/GraphAligner) offers so…
-
Hi,
I was wondering about the `-u` option for `Ratatosk`. From the README it says
Ratatosk might use for the correction some unmapped short reads
(-u unmapped_short_reads.fastq) which …
-
Hello,
I'm having some issues during the compilation of Ratatosk in MacOS Catalina. Running make results in the below error
```
[ 70%] Building CXX object src/CMakeFiles/Ratatosk.dir/Graph.cpp…
-
Hello,
I am trying the latest Fantomas on the default SAFE stack template, using Saturn. For the most part, it is formatting the code well. However, Saturn uses a number of custom computation exp…
-
Hi @fenderglass :
I have performed error correction on pacbio rsII data using [FMLRC](https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-018-2051-3) and Illumina short reads. One of …
-
-
`let!` bindings don't indent the same as non-let! ones:
```fsharp
let x data =
async {
let bar =
data
|> Array.map id
|> Array.filter ((=) 1)
…
-
Build 'Ratatosk' is failing!
Last 50 lines of build output:
```
[...truncated 4.32 KB...]
test test_collide_aabox_dot ... ok
test test_collide_dot_dot ... ok
test test_collide_rbox_aabox_intersectin…
-
Rename crates to for example replace webhogg with ratatosk/rask
-
We're needing to restart the machine I've been running FLYE 2.6 on for a few months and it just finishing up the "Aligning reads to the graph" step. I'm also aware there's a bug with large repetitive …