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Thanks for starting to add a new dataset to example-datasets! This issue template includes the key steps, see [add-new-dataset.md](https://github.com/riboviz/example-datasets/add-new-dataset.md). Plea…
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Hi, thank you so much for the ribominer package to help in my ribosome profiling analysis.
I am wondering how to export the the read density for each bin in the options of the function (MetageneAn…
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https://mp.weixin.qq.com/s/NBj3J7KhQon4MflZZ_yA3Q
ixxmu updated
2 years ago
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@j-berg: It appears that paired end input libraries are accommodated with `peRNAseq`, but I don't see any mention of paired ends in the `riboseq` documentation at https://xpresspipe.readthedocs.io/en/…
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Write blog post for both:
* EPCC [blog](https://www.epcc.ed.ac.uk/blog)
* The Software Sustainability Institute [blog](https://www.software.ac.uk/blog)
Link to previous blog post:
* EPCC, [R…
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Is there a quick way to pullout the translation efficiencies for all experiments at the end of the RiboR walkthrough? Right now am using cbind join the te_CDS and rc_CDS$transcripts, but am not sure t…
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https://mp.weixin.qq.com/s/67XcexbMJnIy6-GyI8OwzQ
ixxmu updated
2 years ago
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Continuation of issue ticket #55
**Overarching goal:** Add datasets from [Lareau et al 2014](https://elifesciences.org/articles/01257) with the aim of replicating the results of the 17 inhibitory …
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Thinking towards the examples repository, could we put relevant metadata in the config.yaml to indicate provenance of the yaml file?
Preliminary suggestion:
```
provenance:
author: John Smit…
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Hi, do this riboflow pipeline suitable for paired end data set.
Cheers,
Ranj