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Hi whitematteranalysis team,
I am having RAM issues running the wm_apply_ORG_atlas_to_subject.sh script with dMRI data.
I get "Unable to locate 25,7 Gib for an array with shape (2500, 1379526) a…
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I'm not sure whether I'm doing something wrong, but I had a quick go at displaying a TSF file today, prompted by [this forum post](https://community.mrtrix.org/t/help-for-changing-the-colormap-of-tsf-…
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## Project info
**Title:**
Macapype: external pipelines
**Project lead and collaborators:**
- David Meunier
- Kepkee Loh
- Julien Sein
- Bastien Cagna
- Olivier Coulon
**Description:…
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I've been doing more tractography lately and was getting really bad tract segmentation on a particular group of scans acquired on a Siemens Prisma. After talking to Yogeth Rathi's group and @mattciesl…
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Having the option to use an arbitrary user-defined colourmap for displaying streamlines (with the -tractography.tsf_load flag) would be great, as discussed [here](http://community.mrtrix.org/t/custom-…
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I have single shell (one b0 and 30 b1 volumes) data with low b-value (b1=1000). I applied common pre-processing steps (denoising, preproc and bias correction). I estimated the response function of ea…
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Hiya,
Thanks for this great tool.
Installation no longer works because this version is not compatible with newer versions of eigen. Errors are reported along the lines of:
```
failed with o…
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Not sure if this is a design choice, but the app interface (https://brainlife.io/app/5ea7dbebf1745d70baf80678) doesn't currently have a parameter input for this. seed_density parameter input theoret…
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We were able to get slicer version of UKF Tractography with --NODDI option to work well on Linux but
with the same data, the --NODDI option will crash using MACOS version. The 2 tensor model works …
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Automated Fiber Tracking Methods using Atlas, or are there any other methods to create fiber tracks.
Is the fiber tracks for each dataset stored somewhere or the fiber tracking is done and validated…