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It seems AlleleCall is broken in 3.3.0 built inside your dockerfile:
`docker run -v $PWD:/analysis chewbbaca:3.3.0 bash -c "cd /analysis;chewBBACA.py AlleleCall -i Expt1_genomes -g schema/Pseudomonas…
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**Describe the bug**
The Timeslots of the CDI 2 classes seem to be incorrect
**To Reproduce**
Steps to reproduce the behavior:
1. Go to https://fenix.tecnico.ulisboa.pt/disciplinas/Fis3/2023-202…
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When a chewBBACA module is invoked without passing any arguments, the program throws an error and exits with with a code different than zero. Instead, the help for that module should be displayed, wit…
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Hi chewBBACA team
I'm running into an issue when using the `AlleleCall` option with `chewBBACA v3.3.4`. I have 347 bordetella assemblies and I'm using an external scheme that I have already run `Pr…
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Viva,
Parabéns pela iniciativa!
Venho só sugerir uma alteração.
As estimativa de 250g/km está um pouco sobredimensionada.
Provavelmente porque assume que as viagens em GIRA vêm substituir viagens em …
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- **Etcher version:** 1.19.17
- **Operating system and architecture:** EndeavourOS x86_64 (amd64)
- **Image flashed:** None
- **What do you think should have happened:** it should have installed s…
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Hi :)
I had such problem while creating a new scheme on 200 ref sequences from NCBI. I have no idea how to solve it. I'll be grateful for help.
Kasia
CPU cores: 22
BLAST Score Ratio: 0.6
Tr…
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### Packages:
https://aur.archlinux.org/packages/python-pywhat
### Latest chaotic version
latest
### Reason for rebuild
When installed by pacman, I get:
```
resolving dependencies...
looking f…
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We would like to gain access to the advanced diagnostics available in the full version of Osiris. To do this, it looks like we need to join the Osiris consortium at the User level. Please advise. I pr…