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I did generate the drugui.pdb, drugui.psf ( files from DruGUI - preparation of system ) successfully but I could not be able to run psfgen script as I would like to add few ions to it. The system cont…
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Hi Parmed developers,
I'm having trouble loading .rst7 files writted by parmed into VMD. The problem seems to stem from the second line of .rst7 file where the 'time' float is written after the num…
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### Expected behaviour
Reading a multi-frame PDB file created by VMD into mda.Universe
### Actual behaviour
Crash on PBD.py
``` python
_read_frame
```
because the VMD multi-frame PDB …
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Hi I get this error when I prepare my system
Unable to load file 'init.pdb' using file type 'pdb'.
Unable to load file 'init.pdb' using file type 'pdb'.
while executing
"mol new init.pdb"
…
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Hi,
I was running coMD in VMD 1.9.3. The following error pops up and kills the process.
can't read "::comd::gpus_present": no such variable
can't read "::comd::gpus_present": no such variable
…
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I've been trying few visualize program but VMD is the best one IMO, in term off rotating molecule, mouse sensitivity.
Most of other programs give me a feeling of 'heavy' movement.
So what do you t…
hainm updated
8 years ago
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Hi,
I am trying to install getcontact. I am getting following error:
ImportError: /home/sp1564/.conda/envs/vmd-python/lib/python3.9/site-packages/vmd/../../../libnetcdf.so.19: undefined symbol: H5Ps…
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Thanks a lot for the VMD library.
One issue is that the execution of VMD on EEG signals requires a huge amount of memory and takes a very long time to execute. One EEG signal is around 5.4 Million …
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My current workflow is to use plugins to import into KKBP bones, simplify armature preparation for Unity, bake light color textures, and export FBX file. Next, I need to open Unity,import FBX , fix th…