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Thanks for the excellent project nnUNet and the comparison of segmentation benchmark architectures in the new paper “**nnU-Net Revisited: A Call for Rigorous Validation in 3D Medical Image Segmentatio…
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应该是v1的，但是model_restore.py对不上
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When a finish the train epcoh and do the validation ,the "CUDA out of memory" appeared.
I tried to use two Gpus at the same time but it didn't seem to help.
What can I do to make the verification g…
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Hello, could you please tell me how to extract feature vectors???
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This model was retrained in the nnunet framework. For more information, see https://github.com/axondeepseg/axondeepseg/issues/771
I will put the models from all 5 validation folds for ensembling.
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Hello,
I don't have an issue with nnUNet, rather inquiry. I work with plant MRI and used nnUNet for seed segmentation. It performs amazingly, especially when it learns a lot from a relatively small a…
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Hi,
when working with Amira/Dragonfly we typically annotate only a small subarea, train with this subarea and then apply it to the whole volume.
I've not found in the documentation how to do tha…
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Hello,
Thank you for providing the code. I have a couple of questions regarding the results reported for the BTCV dataset (8-abdominal multi organ segmentation task):
1.) In Section 3.1 of the…
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Dear author,
I have a quick question,
Do nnunet support multi task with different number of labels?
Currentely, I am working with three task,
one of these tasks comprises five labels, while t…
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I encountered a FileNotFoundError when running `nnUNetv2_plan_and_preprocess` with `--verify_dataset_integrity`.
in:
https://github.com/MIC-DKFZ/nnUNet/blob/5db96042779fe720dc6cef7ba4b32d2f9d127d31/…