-
especially for the custom ones.
-
When I run the q2-dada2 workflow (via Rscript, identical input data) on my machine, the processing time is 5x longer when run inside the q2 conda environment than when run in the standard shell (the n…
-
A high school friend of mine is trying to implement FFT in Matlab - I don't know much about the FFT algorithm or signal processing so I'm hoping someone here has expertise in this area.
Our specif…
-
Hi Ben,
I work with fungal metabarcode datasets, and have been really loving being able to use DADA2 since y'all incorporated variable length reads. Thanks for that! But, I've discovered something …
-
We use (linear) PCA to map the PoN, each datum of which is a high-dimensional vector over targets, to a low-dimensional manifold. Do we really believe that this manifold is simply a hyperplane?
Conc…
-
Prior to fitting the dynamic graphical model, the data has to be centered. How does scaling affect the performance, should we ensure unit variance? It seems that magnitude could affect the l2 regulari…
-
I've been trying to use `patch_NLM` with a nontrivial data discrepancy term, but my results seem to always diverge. The call is basically, using [this ODL branch](https://github.com/odlgroup/odl/pull/…
-
I am trying to run this but got NaN errors when the program prints validation costs/accuracy. The command I ran is:
```
THEANO_FLAGS='floatX=float32,device=gpu0,lib.cnmem=0.8' FUEL_DATA_PATH=. \
./…
-
Moving this to here as I'm cleaning out old email discussions.
Seemingly the recommended approach is to follow `dwidenoise` with [this method](http://onlinelibrary.wiley.com/doi/10.1002/mrm.26054/abs…
-
Hi! I'm new to MRtirx3 and tried a couple of functions. Most work fine, but trying to convert a dicom-folder to .mif format fails badly (see attached picture). I tried to manipulate some options such …