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Hello Julie,
I tried to rerun the PCA and HCA analyses with your assembly data, but I ran into some errors and reproduction issues.
First, I encountered the following error with get_kmers_occure…
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The Bertopic installation, (**Edit- Python Version 3.9.12**)
`pip install bertopic`
fails by throwing the below error :
` note: This error originates from a subprocess, and is likely not a p…
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I'm really loving the additive force graph. Is there an easy way to get the data from the html object, specifically the similarity ordering mapped to the original index for the entire sample dataset?
…
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It should be based on molecules similarities.
Add clear clustering via quantification of distance.
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In Hierarchical Clustering selecting None (in Pruning) or Manual (in Selection) only works in a narrow area under the radio button and its text (red area on image).
![image](https://github.com/biol…
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```
-- Installing: /usr/local/include/opencv2/core/cuda/vec_traits.hpp
-- Installing: /usr/local/include/opencv2/core/cuda/warp.hpp
-- Installing: /usr/local/include/opencv2/core/cuda/warp_reduce.h…
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To test the generalization of the model trained on Stain2, I will now evaluate it on Stain3. Based on the results, further advancements will be made by training on plates of Stain3 (and possibly then …
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Maybe it's me, but I feel the current example we have comparing agglomerative clustering algorithms doesn't provide a great intuition. I'm not super familiar with them, so maybe it's just my lack of u…
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- Demos about missing values and anomaly detection
- hierarchical clustering
- simple time series generator
- windowing function
_**if you want to contribute to the development you are welcome**…
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Submitting Author Name: Klaus Schliep
Submitting Author Github Handle: @KlausVigo
Other Package Authors Github handles: (comma separated, delete if none) @emmanuelparadis, @liamrevell,@darunabas…