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Please add a notification to GE to notify our users that our underlying data has changed and that Census.
Improvements to our data: Gene Expression now includes more data from [CELLxGene Census](http…
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https://github.com/openpipelines-bio/openpipeline/blob/88cdc240d49651dc222b6ede7a660645b69953de/src/query/cellxgene_census/config.vsh.yaml#L94C24-L94C33
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Hi,
Thank you for the amazing work! I noticed that you mentioned "... use all non-zero expressed genes as input for pre-training". May I ask which code piece in the repo implements this, i.e., remo…
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## Motivation
We currently don't have a final system to tag and surface LTS data release in the `release.json` and the API respectively.
**Definitions**
Please see definition of data releases…
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- [x] write llm-reducer (new file)
- [x] write async API call within src/actions/index.js
- [x] write llm-actions (new file)
- [x] populate my UI elements with the new states
- [x] write dummy API cal…
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Context: #1974
The following edits are derived from review of the Retina bionetwork and cellXgene references:
CL label | Edit | dbxref
-- | -- | --
Mueller cell | Add "Muller cell" as exac…
ghost updated
10 months ago
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1. @ebezzi pointed out that quite a few spatial data coordinates are not aligned with their corresponding images. So we might need to find an image registration process to align the dots with the imag…
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**Background**
In 2021, the Single Cell team conducted foundational research that revealed biologists want to see where a gene or genes of interest are expressed in order to generate hypotheses. Resea…
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## Describe the bug
This Python (modified from the Python '[quick start][]'; I do not have experience with Python) returns a 3371 rows x 7 columns result in a few seconds
[quick start]: https://…
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Is there a way I can download the raw datasets (FastQ files) based on certain filters (either through collections or datasets), as well as the metadata associated with it? Additionally what are all th…