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Hello,
I am trying to install dorado v0.6.0 to a new Ubuntu 22.04 machine. I have already installed all Linux dependencies, and then am on the configuration step as mentioned in clone and build sec…
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# Issue Report
I am basecalling Nanopore data for methylation calling with [DeepMod2](https://github.com/WGLab/DeepMod2) which tells me to use the `--emit-moves` flag with dorado aligner. I'm strug…
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Wanna redo HAC mode basecalling to obtain more useful data. How could I deal with those 2 folders? Should I directly combine them together into one folder?
Thanks,
Harper
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### Operating System
Ubuntu 22.04
### Other Linux
_No response_
### Workflow Version
11
### Workflow Execution
Command line (Local)
### Other workflow execution
_No response_
### EPI2ME Vers…
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Dear all,
will modphred work with RNA004-data basecalled with Dorado to detect RNA m6A?
Thanks and best
Matthias
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Here are two lists of movies that OMDb could not find. In the first list, OMDb returned 0 results for all Title queries and all Search queries, with and without a Year parameter passed.
One of the…
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Hello
I'm having a memory problem with dorado 0.6.0 that looks like the one I had here: #658
The latter could have been solved by splitting the pod5 dataset into 2, and running dorado separately …
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In the custom barcode TOML description, when defining `min_barcode_penalty_dist` and `min_separation_only_dist` there is a reference to a `max_barcode_cost` parameter. However, I don't see a definitio…
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Hello,
I am fond of using dorado, however, recently I encountered an issue I'd like to report.
I have datasets basecalled and demultiplexed with dorado 0.5.3. The basecalling was performed with…
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Hello! I'm always using dorado 0.5.0 for analyzing ONT reads from bacterial genome on the Linux environment.
Currently, I am trying to demultiplex my barcoded genomic reads, which have 5 unique bar…