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Parsing the script bellow results in multiple errors. Please check.
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## -- PostgreSQL database dump
-- Dumped from database version 9.6beta1
-- Dumped by pg_dump version 9.6beta1
-- Started on 20…
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Hello:
I am playing around NGL these days. It is a really amazing tool for online 3D visualization of molecules. I am just wondering what's the ultimate goal for NGL? Have the developers consider to …
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We are getting an Assertion Error when trying to run `pyemma.coordinates.pipeline`
``` python
# do featurization + tICA by streaming over size-1000 "chunks"
source = pyemma.coordinates.source…
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Hi
I was wondering whether gubbins would be able to accurately detect recombination from a core gene alignment, implemented by Roary?
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To draw extra cylinders/lines inside a ring
![download](https://cloud.githubusercontent.com/assets/272250/16309669/6d9bd668-391e-11e6-843c-e79b7d79ff34.png)
arose updated
8 years ago
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In working toward making OpenMM more friendly toward small molecules and nonstandard residues, we've run into some nontrivial difficulties with the representation in `Topology` that relies only on con…
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I joined the Matchmaker Exchange group late last year. After reading up the work done by GA4GH, I found the avro schema files confusing.
After several working group calls and many emails, I managed t…
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As a user of the web application, I am able to view details about the existing monomer or sequence, so that I can explore the existing molecule more in depth.
Requirements:
- Monomer detail view adde…
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hi,
is there anyway to add the electron density map?
![](http://www.topsan.org/@api/deki/files/6426/=LLPdmmap.png)
hainm updated
8 years ago
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In liquidReactor, RMG can recognize any existing species or newly generating species as a solvent as long as the solvent is named the same thing in the solvent block of the input file and in the speci…