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Hi,
we can find neighbors with both sq.gr.spatial_neighbors() of squidpy and sc.pp.neighbors() of scanpy. here's my question:
1, what's the difference between them and which one should I use …
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Cluster the data that is exported in #91
The properties are:
- Sentiment (positive, negative, neutral)
- Question/No question
- Emotion
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For some reason, the script `compile_withcmake.sh` does not reach an end, even though the CMake configuration reaches an end. Here's the output:
```txt
~/KaHip> gunzip -c KaHIP-3.14.tar.gz | tar xf …
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My use case is the following. Inside a function `f`, after some computation, I get a matrix for which I am sure that it is a sparse matrix. I wish to convert this matrix to a sparse format using BCOO…
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This is Scylla's bug tracker, to be used for reporting bugs only.
If you have a question about Scylla, and not a bug, please ask it in
our mailing-list at scylladb-dev@googlegroups.com or in our sla…
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Due Feb 14th
Acceptance Criteria:
- Decide on the main accomplishments of our work. (What have we already done and what will we soon accomplish?)
- Write the methodology portion of the paper.
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I tried to run the jupyter notebook tutorial as is after installing DeepTCR Development Version into its own Environment like this : pip3 install git+https://github.com/sidhomj/DeepTCR.git.
Running…
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- [x] [**Degree distribution**](https://networkx.org/documentation/stable/reference/classes/generated/networkx.DiGraph.degree) (Razielle)
* all degrees
* in degree and out degree to show authors …
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### Description of the question
Hi Kelvin,
I have some basic questions about how dandelion is working and trying to find the biological meaning of each step in dandelion. To do this I am asking my…
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I would like to color the umap representation using gene expression values. For ease of use I'd like to display the Gene name instead of gene_id which are the adata.var_names in my case. Setting `gene…