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sidhomj
/
DeepTCR
Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data
https://sidhomj.github.io/DeepTCR/
MIT License
110
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40
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Issue loading single cell data
#85
leeanapeters
opened
2 months ago
1
more detailed tutorials or instructions
#84
arnavaz
opened
5 months ago
0
Recommendations for handling large datasets
#83
leeanapeters
opened
1 year ago
1
Question about dropout rate
#82
emm1R
opened
1 year ago
0
Optimization of the threshold parameter in hierarchical clustering
#81
CharlineJnnt
opened
1 year ago
1
Understanding Training Strategy of Supervised TCR repertoire classification on HIV dataset
#80
Albert-Shuai
opened
1 year ago
0
Bump werkzeug from 0.16.0 to 2.2.3
#79
dependabot[bot]
opened
1 year ago
0
Bump certifi from 2020.12.5 to 2022.12.7
#78
dependabot[bot]
opened
1 year ago
0
Bump pillow from 8.0.1 to 9.3.0
#77
dependabot[bot]
opened
1 year ago
0
Bump tensorflow from 2.7.0 to 2.9.3
#76
dependabot[bot]
opened
1 year ago
0
Performance
#75
zshu000000
closed
1 year ago
0
Bump joblib from 0.17.0 to 1.2.0
#74
dependabot[bot]
closed
1 year ago
1
Bump protobuf from 3.11.2 to 3.18.3
#73
dependabot[bot]
closed
1 year ago
1
Bump numpy from 1.18.0 to 1.22.0
#72
dependabot[bot]
closed
1 year ago
1
Suggestion for UMAP_Plot() function
#71
psimps21
opened
2 years ago
0
Bump tensorflow from 2.7.0 to 2.7.2
#70
dependabot[bot]
closed
1 year ago
1
Shared Motif for Clusters after Phenograph clustering
#69
jkbenotmane
opened
2 years ago
0
Bump pillow from 8.0.1 to 9.0.1
#68
dependabot[bot]
closed
2 years ago
1
sequence_inference error
#67
Albert-Shuai
closed
2 years ago
6
load previous-trained model
#66
hereagain-Y
closed
2 years ago
3
Can´t load own Data using DTCR_SS.Get_Data
#65
junyho486
closed
2 years ago
7
Bump protobuf from 3.11.2 to 3.15.0
#64
dependabot[bot]
closed
2 years ago
1
Bump tensorflow from 2.7.0 to 2.8.0
#63
dependabot[bot]
closed
2 years ago
1
Bump tensorflow from 2.7.0 to 2.7.1
#62
dependabot[bot]
closed
2 years ago
1
Bump numpy from 1.18.0 to 1.21.0
#61
dependabot[bot]
closed
2 years ago
1
How to export latent feature matrix resulted by VAE training
#60
Lijizhou2022
closed
2 years ago
4
Getting an import error when running 'from DeepTCR.DeepTCR import DeepTCR_U'
#59
dstcr
closed
2 years ago
1
Bump pillow from 8.0.1 to 9.0.0
#58
dependabot[bot]
closed
2 years ago
1
The dataset used in the regression model
#57
zguo235
closed
2 years ago
3
Extract accuracy of decoded TCRs from Sequence_inference
#56
JulianSpagnuolo
closed
2 years ago
1
No Sample Labels on Dendrogramplots
#55
jkbenotmane
closed
2 years ago
0
Download with docker
#54
Portulaca666
closed
2 years ago
2
Tutorial: Clustering TCR Sequences list index out of Range Error when using DeepTCR in WSL
#53
jkbenotmane
closed
2 years ago
1
Bump pillow from 8.0.1 to 8.3.2
#52
dependabot[bot]
closed
2 years ago
1
Sequence not featurized
#51
fbenedett
closed
2 years ago
7
Inquiry about Fig2.c Motifs Visualization in DeepTCR
#50
pzhang84
closed
2 years ago
1
Bump tensorflow-gpu from 2.3.1 to 2.5.1
#49
dependabot[bot]
closed
2 years ago
1
Bump tensorflow-gpu from 2.3.1 to 2.4.2
#48
dependabot[bot]
closed
2 years ago
1
run DeepTCR using more than one GPUs
#47
qidi-yang
closed
2 years ago
3
Interpreting Sequence_Inference output
#46
CurlsForScience
opened
2 years ago
2
Bump pillow from 8.0.1 to 8.2.0
#45
dependabot[bot]
closed
2 years ago
1
Bump urllib3 from 1.26.2 to 1.26.5
#44
dependabot[bot]
closed
2 years ago
1
Bump rsa from 4.6 to 4.7
#43
dependabot[bot]
closed
3 years ago
1
-
#42
jkbenotmane
closed
3 years ago
0
Bump urllib3 from 1.26.2 to 1.26.4
#41
dependabot[bot]
closed
3 years ago
1
Availability of trained models
#40
jannisborn
closed
3 years ago
1
Bump urllib3 from 1.26.2 to 1.26.3
#39
dependabot[bot]
closed
3 years ago
1
Bump pillow from 8.0.1 to 8.1.1
#38
dependabot[bot]
closed
3 years ago
1
Bump tensorflow-gpu from 2.3.1 to 2.4.0
#37
dependabot[bot]
closed
3 years ago
1
Reproducible clustering
#36
emm1R
closed
3 years ago
5
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