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since i didn't match the synonyms properly before i did it again and got a pretty similar list of mammals.
i imputed data from this new list, trimmed the tree, and run the model again, but now body m…
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### Motivation
SRC20 has a `total_assets()` method to get the number of assets present and we have new log types to retrieve these data
through log scraping.
However it is still impossible retrie…
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Hi , I am using Hibag for HLA imputation. My dataset is GSA genotyped data.
I found when I use the function "hlaBED2Geno" to import the genotype data, there are around 8000 SNPS in the MHC region.…
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Hi,
I've installed imputePSF, and performed a simple test run as below:
> library(imputePSF)
> testlist impute_PSF(testlist)
Error in optimum_k(dataIn[1:(f_first - 1)]) :
could not find…
ykim8 updated
4 years ago
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I do machine learning research using large datasets and missRanger was my goto package earlier, however even that took 1-2 months to impute. Really excited to see an alternative. A curiosity about xgb…
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Hi @aet21 :
In the third step: "Development and application of probabilistic imputation model" of your GB paper, the DNAm levels of unexpressed genes are estimated by a 2-state mixture of gamma di…
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Just like how we have scale resolution.
When Facet is nested, we need to resolve domain of inner facet and impute additional facet cells accordingly.
For example, given a spec:
```
{
"$sch…
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Probably for a future point:
```julia
julia> X = AbstractArray{Union{Float64, Missing}, 2}(randn(5, 7))
julia> X[1, 2] = missing
julia> X[3, 5] = missing
julia> cov(X)
7×7 Array{Union{Missing,…
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Create one or more input 23andMe file which encodes several specific situations.
Test corresponding rows of the imputed VCF:
Expected cases:
* homozygous mutation
* heterozygous mutation
* Y chromo…
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Hi,
OrdinalDomain only takes Ints as min and max values, but this does not work in the case where ordinal values may be Floats. For example, having ordinal values [0.0, 0.1, 0.2, 0.3] will result in …