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Dear Pradeep and colleagues,
I kept running into errors when trying to use the Glasser2016 atlas and wondered what I might be doing wrong. I can get graynet to work with the fsaverage atlas, but n…
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### Summary
In the older version of t2samp, "mask, masksum = utils.make_adaptive_mask(catd, mask=mask, getsum=True, threshold=3)" causes signal loss problem in the prefrontal areas, especially…
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### Description
In ITKReader, ```itk.size(img)``` should not be reversed since it outputs correct size of an image. Instead, itk.array_view_from_image(img, keep_axes=False) provides the transposed …
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In the light of https://github.com/dandi/dandi-cli/issues/21 it might be highly benefitial to compress files during upload
@mgrauer - does girder support receiving compressed payload?
@bendichte…
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I am trying to come up with a BIDS solution to the following problem.
We are running participants through an ieeg study. Each task is split up into multiple blocks (delimited as runs for BIDS). Par…
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Hi, i installed the latest version of bidscoins via the instructions on read the docs;
$ pip install --upgrade git+https://github.com/Donders-Institute/bidscoin
:Afterwards, I try to run the bid…
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**🚀 Feature**
I appologies to still using SPM coregister function. They made the "bad" (but pratical in some case) choice to modify the nifti sform, leaving me with volume having to different aff…
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I have the following questions:
1. Now that we have [`ITKReader`](https://github.com/Project-MONAI/MONAI/blob/master/monai/data/image_reader.py), why do we still need `NibabelReader` and `PILReader…
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Thank you for all your hard work on rsample. I know this has been a topic of some debate in the past (and I do see a number of closed and open issues pertaining to this), but I've been finding the com…