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New term request: Irritable bowel syndrome. Synonyms: IBS, spastic colon\
Source: \
Parent: \
Disease association:
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I wonder if ASD should be removed as a synonym for atrial septal defect.
From what we're seeing in our userbase (MyGene2), most people entering "ASD" mean "autism spectrum disorder" instead of atr…
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In the Age element we suggest that HPO terms can be used to represent age.
```
// age_class : { term_id : "HP:0003596", term : "Middle age onset" }
OntologyClass age_class = 2;
```
But of c…
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Would it be possible to define the following terms in EFO, please:
"embryonic lethality"
"synthetic lethality"
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@kimrutherford
@barnabynorman
@martin2urban
@jseager7
When @CuzickA returns it would be useful to prepare a test obo file
for the developers
This only needs a small set of terms. But we p…
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I was trying to set-up a new ontology and got errors pulling-in import ontologies. It looks like OSK pulls in ontologies as '.txt' files but then searches for .owl files to import and barfs on not fi…
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**org.monarchinitiative.phenol.base.PhenolException: Did not recognize RelationshipType: http://purl.obolibrary.org/obo/RO_0000087**
at org.monarchinitiative.phenol.ontology.data.RelationshipType.…
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(Required for #1636)
The current Docker image can't process annotation extensions since it doesn't have OWLTools installed. Java and OWTools will have to be added to the image, and presumably OWLTo…
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I can't add extensions at all right now even via the free text option (presumbly because I am not logged in as Admin).
It would be useful to be able to use GO extensions straight away. We can ext…
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Trying to model the high level terms:
![phi_high_level_phenotypes](https://user-images.githubusercontent.com/7359272/36662583-b6fedc9c-1ad6-11e8-8483-a49e044f926d.jpg)
Here is a quick moc…