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If we try and run a job using a GPU in RELION (using grabnode here) it will exit with this error (below). Exact some job settings will run successfully on the same node if RELION/3.1.0...... is loaded…
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We are trying to run jobs requiring access to Nvidia GPUs in singularity containers. For organisational and technical reasons we need to be able to run these jobs within a cascade of containers, i.e. …
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This dataset fails to load properly when initialized as a `RelionSource`.
Sample script to reproduce:
```python
DATA_FOLDER = '/tigress/cl5072/datasets/10073/data'
STARFILE_IN = '/tigress/cl50…
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Currently, the zarr conversion seems to run all on a single slurm node. That's fine to process our test sets and make sure the conversion is working.
But eventually, we may have e.g. 1 TB of images…
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Currently we represent STAR files as `OrderedDict`s of pandas `DataFrame` objects. The implementation, when reading a STAR file, treats a regular set of key-value pairs, and a single-line loop the sam…
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I installed cryolo (GPU11) with conda, everything is successful. And then running into the trouble of glibc. I followed the troubleshooting directions, but couldn't finish because of the error "make: …
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I am trying to build Relion ver4.0 in a docker container. I used commit:
137e73e51e9ee4673804402a285c22da1db73d22
https://github.com/3dem/relion/tree/72bbf0c06cea68f8992328703ee5ae5f3d1fc9b7
…
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Hello, We have some problems running topaz within Relion 4.0 and would appreciate your help. We tested Topaz and found it worked fine by itself. But we got the following errors when launching Topaz in…
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**Describe your problem**
When using a JoinStar job on particles.star coming from 2D classification / Select job, only the first star file is added to the output. The issue happens on multiple, unr…
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Dear Relion developers,
I am using Relion 3.1 beta commit a0af57. When running 3D classification with global searches it runs without issues, however, when I switch to local searches to separate di…