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eg something like:
```
$ cromwell quickstart
## BACKEND ##
Would you like to run tasks [local], [sge] or [papi] (Google cloud)?
> [local] | papi
Installing gcloud......
Done! Would you like me …
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Dear Cromwell developers,
Our group has gone all-in on WDL with Cromwell, because it fits our use case perfectly. But since no workflow system is perfect, we have had our issues with Cromwell as we…
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There should probably be a document somewhere that explains how to set up the database and rabbitMQ. Some new users are trying to run the code tests and it fails if they don't know they need to set up…
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How can I set analysis depth limit instead of nodes?
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CRAMs aligned during the NAGIM project ([corresponding Terra workspace](https://app.terra.bio/#workspaces/terra-kccg-production/nagim-demo-workspace/workflows/terra-kccg-production/WholeGenomeReproces…
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Hi! Awesome work!! Congrats for all the amazing work!!
I'm currently having an issue downloading my world with Pokemon's spawned, Pokemon statues as well as different NPCs. This type of entities ap…
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## **Describe the bug**
The pipeline stalls or ends prematurely before the IDR steps.
I have successfully run the pipeline on datasets using the mm10 genome, but it stalls when I use custom genomes…
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The essence of this issue is that:
...I have a workflow that calls sub workflows
...My Workflow validates and everything is swell
...I want to now run this against a Cromwell server, and turns ou…
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From https://github.com/mjkoster/ODM-Examples/issues/2:
> We also need a provision for numbered namespace tags. We would advocate for 16-bit vendor namespace identifiers with 0x0000 reserved for OD…
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## Documentation request
### Tool(s) or class(es) involved
GermlineCNVCaller
### Description
I'm trying to get a pipeline running to call germline CNVs on small cohorts (20-40) PCR free whole…