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I run image_export.py and log2timeline.py in an automated script and want to use **--partition all** so that I don't have to worry about identifying the correct partition.
When using a filter file, s…
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Hello to all,
I have 10 vcf files - 5 female fish and 5 male fish, I have merged all 10 fish to one vcf file.(all_fish.vcf) I performed the VcfSampleCompare analysis on 'all_fish.vcf' ,
My command…
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Fail to install with command ` pip install -r requirements.txt `
```
Collecting pandas~=1.2.5 (from -r requirements.txt (line 1))
Using cached pandas-1.2.5.tar.gz (5.5 MB)
Installing build dep…
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The following test cases in the [release_2_1](https://github.com/buildingSMART/BCF-XML/tree/release_2_1) branch violate the [markup.xsd](https://github.com/buildingSMART/BCF-XML/blob/d67e2a16425f47401…
thbeu updated
2 months ago
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Hello,
It seems like hap.py does not properly handle phased variants that overlap with non-phased variants.
Here is an example:
```
chr20 55234351 . A T 500 PASS AC=1;AF=0.5;AN=2;DA=39;DP=78…
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I changed the settings to cache images and download images on first start. No image is shown in the Toniebox tab of t…