-
Having an issue with qqman when trying to plot manhattan plots
A
-
For lineplots, `Plots.Line.prototype.entityNearest` is called in a multitude of usecases when setting up interactions - these include highlighting closest point, tooltips, hovers, etc (e.g. sync linep…
-
Hi, thanks for the great app! Not sure if its a limitation of plotly but it seems like the hover functionality is only based on the x-coordinate, so when I hover over a point quite high on the y-axis …
-
Hello!
I am trying to highlight a set of candidate SNPs on my manhattan plot. I have verified that the list of SNPs was in a character vector and have also taken out all of the NA's from both sets by…
-
Hello,
I was wondering whether there was an option for creating a heat map based on plink LD data that would go along with the manhattan plot?
Thank you,
Marie
-
Hi,
Thanks for the helpful package! I was wondering if there is a way that I can change the dots into vertical lines on the manhattan plot? (Making it more like a histogram and less like a scatter…
-
Hi,
According to this post https://liorpachter.wordpress.com/2014/01/19/why-do-you-look-at-the-speck-in-your-sisters-quilt-plot-and-pay-no-attention-to-the-plank-in-your-own-heat-map/
mahalanobis di…
-
I think we've talked about this a bit before, but what plots do we want to include moving forward? I like the Manhattan and circle plots, but the current states aren't as functional and flexible as th…
-
Dear Stephen,
Thanks for this useful package.
I’m wondering if there is a way to create a manhattan plot for a gwas result without chromosome numbers. The reference genome of interest does not conta…
-
Even with a binning threshold of pval=1e-4, the variant bins are the slow part (~500ms).
Improving the code speeds things up, but I think we're mostly constrained by the cost of drawing ~50k circles …