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The annotation standard for proteomics experiments are not clear enough for curators.
Problems that are causing issues:
1. Differentiating between a purification and an enrichment
2. What to …
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- Topdown proteomics -- ProteoForm nomenclature
- Richard LeDuc: Richard.leduc@northwestern.edu
- Veit Schwammle: veits@bmb.sdu.dk
- Michael Shortreed: mshort@chem.wisc.edu
- Stefan So…
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Hi all,
I want to add Reference Concentration of SLCO1B1 (OATP1B1) transporter protein level in the human I want to use for some simulations. I found the following paper (open access, so attaching)…
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SubCellBarCode: Proteome-wide Mapping of Protein Localization and Relocalization
Subcellular localization is a main determinant of protein function; however, a global view of cellular proteome orga…
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Hi,
run.Reader gives an error while attempting to read a mzML file written by OpenMS tools. I found that the issue is due to the fact that the file generated by OpenMS tools do not explicitly write…
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JUnit tests for org.eclispe.swtchart are missing.
Note: I have written some tests, but not yet ready to share them since package name is not adapted, and also the tests depend on environment at the…
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MassBank validation complains on the wrong order of the fields
RMB writes
AC$MASS_SPECTROMETRY: IONIZATION ESI
AC$MASS_SPECTROMETRY: ION_MODE POSITIVE
The validator wants:
AC$MASS_SPECTROMETR…
tsufz updated
5 years ago
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Greetings
I'm trying to perform quantification with ReporterCLI, and would like to know if there is an example available of an isotope correction factors xml file to give as input. Are these files …
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# Describe the problem
* **I'm submitting a:**
- [ ] problem running the software
- [x] bug report
- [ ] feature request
- [ ] question
* **My MSFragger use case:**
- [ ] _Closed_…
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_For new term requests, please provide us with the following information:_
### 1. Preferred term label
Abnormality of N-Acetylaspartic acid levels in urine
Extra Notes: (Blood and CSF can also b…