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Hi Anna,
I want to use NCEM for other MERFISH data to compare with other tools that how the information differs. I followed your tutorial
https://github.com/theislab/spatial_scog_workshop_2022/b…
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**Issue:** I keep getting the error message `Error in id.split[[v]] : subscript out of bounds` but have not been able to locate in the R package scripts of `lmtp` the code where this issue might occur…
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I put together a starter Rmd for chapter 2 and pushed it to the repo. Like last time, each team should make a copy for themselves and push back to the repo.
This chapter is more matrix heavy, so…
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Scoping is an essential part of any research project, especially in a broad field like Software Engineering Evolution. Here’s a step-by-step guide to scoping your research effectively:
### 1. **Defin…
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```python
1 import scipy.io as sio
3 # Read the MTX file
----> 4 matrix = sio.mmread('/storage/wangshouwenLab/limited_shared_folder/analysis/shouwen/DMR_analysis/matrix/matrix.mtx.gz'…
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Hi HyPyP team, thank you for your great efforts. Having read the introductory paper and the tutorial, I still have some questions regarding the usage of stats.statscluster to achieve cluster-level per…
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Thank you for this amazing package!
**Is your feature request related to a problem? Please describe.**
Currently, there does not seem to be a build-in method to pull or push `obsm` or `varm` annt…
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Creating this master bash script template will allow researchers who aren't command line savvy to easily run the entire pipeline without having to write each phase command out themselves.
Somethin…
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hi, I meet a problem when use caffe2 in Pine64. ubuntu~16.04.1. cpu 4 cores Cortex-A53
In caffe2, multicore cannot use when use eigen do matrix multiply. (the same to use openblas)
when compile I a…
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Now, I remember why I couldn't use this package.
In most of machine learning applications, you need to subset your data in the training set and a test set.
It is much easier if your algorithms takes…