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**Describe the bug**
In the first part of the tutorial the first data.yaml section does not validate for me. I get the error `32 is not of type 'string' in $.persons[0].age`.
**To reproduce**
Ste…
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The ability to _specify_ regular expressions was added in https://github.com/biolink/biolinkml/issues/127. This, however, provides information necessary to emit patterns as part of the JSON Schema. …
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For example, a schema might ask if sequencing samples will be delivered as tubes or in micro-titer "96-well" plates.
If the user picks "plate" from the enumeration in column N, then a legal value s…
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The Slots available for a class can be defined in two ways: either directly inside class definition (as "attributes"), or independently as Slots (which are added to class, or potentially several class…
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**Is your feature request related to a problem? Please describe.**
We are trying to use linkml validation tools to allow ESS-DIVE users to validate data files before uploading them to the portal. T…
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This work is needed as part of the napa compliance squad to address referential integrity issues. @turbomam and I found a number of projects which had workflow execution activity records but that wer…
aclum updated
10 months ago
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(monarch-ingest-N1lpQZPQ-py3.10) kschaper@kevin-ubuntu:~/monarch-ingest$ poetry run lsolr create-schema -C entity -s model.yaml -t Entity
Traceback (most recent call last):
File "/home/kschaper/.c…
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@anastasiyaprymolenna and Natasha are building Metabolomics and Sample Processing data models directly in SQLAlchemy. For harmonization with the NMDC schema, we should examine a LinkML representation …
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the yaml-ld `dandiset.yaml` file includes a `'@context': https://raw.githubusercontent.com/dandi/schema/master/releases/0.6.0/context.json`
that context creates `"dandi": "http://schema.dandiarchiv…
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All quantitative values should show units, this is stored in the JSON as both the verbatim value (e.g. 0.15m) and as a normalized tuple (value=0.15, unit=m)
Related to #448