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Hi Michal,
how about adding some numbers to the front page of the web site as an overview of the data we have
- number of mutations in cancer, population, inherited disease
- number of PTM sites con…
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We often know how a given entity should be labeled. Assignments from knowledge sources should be able to override the NER's default classifications.
For example: the CRF seems to be responsible for i…
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Let's make the search results a little more compact and add some info:
CURRENT VERSION:
TP53
17
+
NM_000546
Coding region: start 7572926 end 7579912 Length: 6986 Transcription positions: start 757…
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I'm editing this list in place, now, so that there'll not be any surprises when I get back from England:
1) Development Deployment:
At time of writing, the development environment is active, and …
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Taxonomy:
The "Taxonomy" tab provides taxonomy subtree for the current taxon level.
Phylogeny:
The "Phylogeny" tab provides order or genus level phylogenetic tree, constructed using core protein f…
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A second ago I created a group called Florida mcr-1 protein family, but I never found it in my genome groups, despite clicking on the Created column head.
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Are these equivalent?
GO:0050983 - deoxyhypusine biosynthetic process from spermidine
The chemical reactions resulting in the formation of deoxyhypusine from spermidine by the enzyme [eIF-5A]-deoxyhyp…
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1) NTR
Arrested protein secretion (is_a: OMP:0007346! protein secretion phenotype)
2) Xref
protein secretion phenotype
xref: GO:0009306 " protein secretion"
APO cross-refs:
id: APO:0000078
name: pr…
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let's remove the kinases of the kinase family that have no binding sites in the protein in the view. I know that I previously suggested the opposite, but some families are quite large and it simplifie…
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These really are overlapping concepts, merge them!
But be mindful about also merging "Protein domains" into "Protein families"