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We have a situation in which many of our samples have UMI and we'd like to deduplicate before running Kallisto. The question is, does kallisto require unsorted reads? Our STAR-aligned bams are positio…
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This ticket tracks the effort to unify the documentation in one place.
- [ ] Port remaining CWIKI guides and documentation to sphinx (will add list of pages for tracking)
- [ ] Port remaining Board r…
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Two queries can get wrongly deduplicated if they are requesting the same query and vars to the same host, but with different HTTP headers. Perhaps we can include all or some request Headers into the `…
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**Describe the bug**
The project uses `numpy = "1.24.4"`. As of `numpy=1.24.0`, `numpy.warnings` has been removed. When running from the `docker-config.yaml`, the image kept crashing until I commen…
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Aftermatch of #58:
After ["Format words into a sentence"](https://www.codewars.com/kata/51689e27fe9a00b126000004) got deduplicated and duplicates are retired, the remaining kata could use some clea…
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`GapEncoder` and `deduplicate` raise different errors when dealing with None or np.nan values, unlike `MinHashEncoder` and `SimilarityEncoder` which run successfully.
Interestingly, the errors diff…
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```
DeduplicationOption deduplication = deduplicate(DeduplicationStrategy.LOGICAL_ELIMINATION);
Query findByTermId= equal(SchoolFeesDefinitionAssignment.TERM_ID,termCompareId);
ResultSet …
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The deduplication vignette you provided seems to be for the case in which you have a set of true/official records. What if I just wanted to deduplicate based on some kind of fuzzy matching criteria be…
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I currently do this manually based on the list of recent participants on the dashboard, but I don't know if it includes everyone who's recently contributed and it's a bit of a faff to deduplicate and …
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Wyng has a tag-with-comment capability. Exposing this feature for Qubes users would be beneficial in identifying deduplicated backup changes to identify which session the user may wish to restore. The…