-
Hello VIP team,
I have been tasked by my structure @bag-cnag to make VIP plugging work for cellxgene.
I am sharing the result here, and am offering to contribute it to the repo via a pull reques…
-
I've been training the `gpuCTM` model and I noticed that after the initial phase of increase in ELBO the training started to yield negative delta ELBO values (this happend after ~1000-10000 iterations…
-
Hi Alex
Is there a reason why the model was not fitted with npx_normalised data?
many thanks
prasad
-
https://pubs.acs.org/doi/10.1021/jacs.3c10941
^ See what they do here to improve things
https://www.science.org/doi/10.1126/science.add2187
-
#### Problem description
> I don't believe this framework is general enough to be appropriate for the wide range of modeling tools that the community will develop. For example, Pathway Tools uses a…
-
For instance, if one wants to understand what the `--oe-active-site-residue` flag in the protein prep cli means, the path through the code looks something like:
`workflows.prep_workflows.cli`
`workf…
-
# AMI-TABLES extracts compounds and percentages
`ami-table` now uses a template file with regexes to extract `compound` and `percentage` columns from tables that contain both. The regex is fairly b…
-
Hello, I am experiencing a key error attempting to use the code 1 for 1 from the example notebook for conditional generation:
https://github.com/microsoft/evodiff/blob/main/examples/evodiff.ipynb
…
-
🤓Me: Okay..the first step is really getting to know the device we are dealing with. That means diving into the datasheets and making sure I understand the communication protocols, whether it is I2C, S…
-
I'm not really sure why the `protein-translation` exercise has an additional `parse` function that returns a `pub struct CodonsInfo