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microsoft
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evodiff
Generation of protein sequences and evolutionary alignments via discrete diffusion models
MIT License
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conditional_generation inpaint import error
#47
ranaabarghout
opened
1 week ago
0
Question not Issue
#46
marjanUofT
opened
1 week ago
2
Two minor syntax error bugfixes
#45
gooley
closed
1 week ago
0
Remove unused mlflow dependency
#44
gooley
closed
2 weeks ago
0
UserWarning: Attempted to get default timeout for nccl backend, but NCCL support is not compiled
#43
maggiedev2024
opened
3 weeks ago
0
Dependency issues when installing environment packages
#42
gadmiraal
closed
3 weeks ago
0
Add IDR index data
#41
sarahalamdari
closed
1 month ago
0
remove esm dependencies from conditional generation
#40
sarahalamdari
closed
1 month ago
0
Scaffolding benchmark produces different sequences every time it is run
#39
abhi-senthilkumar
closed
1 month ago
1
Error while running inpainting task using EvoDiff-seq
#38
aksingh135
closed
1 month ago
1
Non-canonical amino acid sequence seen
#37
sungyounjoo
opened
4 months ago
1
Nothing works
#36
ChenchaoZhao
closed
1 month ago
4
Following basic code doesn't work
#35
dannyoo
closed
6 months ago
1
How to train LRAR
#34
violet-sto
closed
5 months ago
0
Question: ways to improve conditional MSA generation
#33
yzhang-github-pub
closed
1 month ago
1
padding_idx=masking_idx in ByteNetLMTime instantiation arguments
#32
cmarkak
closed
4 months ago
1
msa_oa_ar_maxsub not recognized
#31
jasonkyuyim
opened
8 months ago
2
Running the `evodiff/generate.py` script
#30
Amelie-Schreiber
closed
1 month ago
1
the error in generate sequences using esm1b_650M
#29
Linzy19
closed
9 months ago
2
Question on MaxHamming distance
#28
BSharmi
closed
9 months ago
1
Error with IDR inpainting with Evodiff-MSA
#27
ZhiYeG
closed
1 month ago
1
Fix LRAR model loading
#26
sarahalamdari
closed
1 month ago
0
Error Loading State Dictionary in ByteNetLMTime: Unexpected Keys
#25
PodevynLoris
closed
10 months ago
6
Fix bug in trrmsa dataset
#24
JonathanDZiegler
closed
10 months ago
0
Indexing bugs in TRRMSADataset
#23
JonathanDZiegler
closed
10 months ago
0
Allow diffusion to gap character in OADM models?
#22
elibixby
closed
10 months ago
1
Error Loading Pretrained Model with `--pretrained` Flag
#21
PodevynLoris
closed
10 months ago
0
A Dockerfile to run EvoDiff locally in a container (with GPU support)
#20
colbyford
closed
1 month ago
1
Using generate_msa()
#19
mcale6
closed
10 months ago
3
Question about fine-tuning
#18
PodevynLoris
closed
10 months ago
0
KeyError: '!' during conditional generation
#17
cmwilson252
closed
1 month ago
5
fix minor typos
#16
guillaumehu
closed
10 months ago
0
cleanup train imports
#15
sarahalamdari
closed
10 months ago
0
Inpaint VS Scaffold
#14
PodevynLoris
closed
10 months ago
1
Add test data to data/
#13
sarahalamdari
closed
11 months ago
0
Missing uniref50_aa_ref_test.csv
#12
andrew0901
closed
11 months ago
2
TypeError: forward() missing 1 required positional argument: 'y'
#11
jsteward2930
closed
4 months ago
2
Missing data files: lengths_and_offsets.npz, consensus.fasta, and splits.json
#10
Linzy19
closed
11 months ago
3
tag device='cuda' not working
#9
arjunsbalaji
closed
1 month ago
4
no generate directory
#8
arjunsbalaji
closed
12 months ago
1
Fixed repetition in Datasets section of README
#7
thrkll
closed
11 months ago
0
Add model descriptions
#6
yangkky
closed
1 year ago
0
Notebook
#5
nityathakkar
closed
1 year ago
1
Clean
#4
nityathakkar
closed
1 year ago
0
generate + model_perp pretrained models
#3
nityathakkar
closed
1 year ago
0
Clean
#2
nityathakkar
closed
1 year ago
0
Action required: self-attest your goal for this repository
#1
microsoft-github-policy-service[bot]
closed
1 year ago
6