-
**Describe the bug**
Running GRNBoost2 produces an error at the very last step.
Reproducible with the tutorial (https://pyscenic.readthedocs.io/en/latest/tutorial.html) using the GSE60361_C1-3005…
-
Dear developers,
Hello. I have been using MoDec v 1.2 and I would like to know how the "Score" in the output file "Responsibilities/bestPepResp_....txt" is calculated. I couldn't find the calculat…
-
A table of known nsp13 inhibitors in the literature can be found here. Users are encouraged to add known inhibitors that are not already in the table following the format shown:
![image](https://us…
-
Hello, I am interested in understanding precisely how the lineplots are generated, with rgt-hint --differential for ATAC-seq. This is as a follow up to issue #116, where @lzj1769 offered some informat…
-
- [ ] Finish molQTL plotting scripts and plot coverage data for bunch of Colocalized QTL effects
- [ ] Add more GWAS. Need to edit some scripts to accommodate binary outcomes for some gwas... see (…
-
Hello,
Thank you for creating this tool, it's been very easy to get using following the documentation. Would you be able to write a bit on how best to interpret and use the prediction results? In …
-
@rawnakhoque I asked the PDF in our lab and he showed me that everything has been done in bash. Follow the installation and basic configuration step by step [here](http://homer.ucsd.edu/homer/introduc…
-
**Have you checked the [list of proposed rules](https://github.com/Benjamin-Lee/deep-rules/issues?q=is%3Aissue+is%3Aopen+label%3Arule) to see if the rule has already been proposed?**
- [x] Yes
…
-
**Date**: Aug 8th 2023
**Time**: 2pm UK time [other timezones](https://www.timeanddate.com/worldclock/meetingdetails.html?year=2023&month=8&day=8&hour=13&min=0&sec=0&p1=43&p2=136&p3=37&p4=771&p5=235&…
-
Hi,
I'm trying to run lncLOOM with the '-eclip' option but I need the narrowPeak data first. Is '/home/caroline/eCLIP/narrowPeakApr2019' a folder of all ENCODE Narrow peak files in bed format or is …