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Not logs, but a table with an entry for each datum that lists source file and XPath, rule, s/w release and date.
Idea is to reconcile data brought into OMOP with a more simply collected list of avail…
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When doing code coverage, there is no way how to find out in the generated report the original coverage
database that lead to the coverage item being covered or uncovered. This would be a nice featur…
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Currently code coverage is captured from our 'Sonar' test runs
This is done by enabling 'jacoco' in the build. This attaches an agent to the jvm used by surefire for running Unit Tests. Coverage d…
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```
iss generate --draft GCF_000196335.1_ASM19633v1_genomic.fna -o GCF_000196335.1 --cpus 6 --model novaseq --coverage_file coverage.txt
INFO:iss.app:Starting iss generate
INFO:iss.generator:Usi…
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An OPAL policy-store is an interface that enables OPAL to manage policy-engines that can make authorization decisions via OPAL clients.
This issue is a feature request to add OpenFGA as a policy-st…
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In CCDA-tools, the section_code_snooper.py included metadata that directs it to certain sections. This list is incomplete, though so are our plans.
A new script there raw_section_snooper.py doesn'…
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Dear developers,
Thanks for a great software package to analyse epiGBS data efficiently.
I have recently been running the pipeline on one of my datasets and would like to calculate the read cove…
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### Bazel Coverage
Bazel provides a way to analyze the coverage of test targets using command
```
bazel coverage //:test_target
```
or
```
bazel test --collect_code_coverage //:test_targ…