-
Dear Professor,
I hope this message finds you well. I am currently following your tutorial on single-cell genomic data analysis using infercnv and have encountered a specific issue at STEP 15 (comput…
-
As of the last few weeks, dendrograms no longer render in the studywide sample QC report. They're still created as separate PDFs.
-
Hi,
1. The phrase "below threshold" is a tiny bit confusing. So colored clusters are *not* significant?
2. Also, in the same figure "Differential binding score" there are some circles that are …
-
Hi @Vannghia69. I just now had a chance to test your new implementation of the dendrogram optimization on a more realistic and larger dataset: depending on the size and the "alignability" (i.e. how ea…
-
Dendograms can extend beyond the range of the SVG, even though there is plenty of spare screen space. There probably needs to be a second wider div to accommodate reasonable label length.
-
Node links are not obvious, so probably require some visual feedback. Also, node label should be clickable.
-
Good afternoon,
I have plotted a heatmap and was trying to filter in some samples (Biological Process and Hippie, for example).
Original plot was:
![example](https://github.com/neuhausi/canvasXpr…
-
[Episode 7](https://carpentries-incubator.github.io/high-dimensional-stats-r/07-hierarchical/index.html)
A great end to the lesson in my opinion that very sensibly builds on K-means clustering in t…
-
Hi @JimWhiting91!
Love your tool, has been really helpful for visualising fixed SNPs in my data!
I'm having an issue trying to plot the dendogram tip labels back on the clustered plot.
Have been …
-
Hi. I assume that the Hierarchical Clustering Dendogram is to be used as an attractive and convenient version of hierarchical clustering, whereas the Hierarchical clustering method gives a choice of s…