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Hi, first of all, many thanks for maintaining this library and in particular this port to C++.
I'm starting to write a library for scientific image processing (Electron Microscopy images) and I wa…
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https://arxiv.org/abs/1708.04692
> In this paper, we propose a novel application of Generative Adversarial Networks (GAN) to the synthesis of cells imaged by fluorescence microscopy. Compared to na…
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I trained the nuclei images from the Segmenting Nuclei in Microscopy Images project, both network heads and all layers, with 10 epochs for each (20 total), using the mask_rcnn_coco.h5 weight file as t…
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Hi,
thanks for creating this very useful tool! I want to apply pystackreg to register two microscopy images. The reference image has a high and the second image has a low SNR. However, after alignm…
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Documenting this weird bug I ran into while working on microscopy files.
During the training/validation/testing steps, I get good results and predictions are visually OK. However, when trying to se…
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@manerotoni
I had now several users that wanted to measure shapes (e.g. volume) of objects that are at least in one dimension close to the diffraction limit.
I think it would be very important …
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**Is your feature request related to a problem? Please describe.**
New laptop, I use dark mode (Mac, OSX 12.6.2), PYME look's ridiculous, which I'm "ok" with, but it's impossible to read text in some…
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When I was looking around for the specification/documentation of the msa format, I found this pure python package, which implement reading/writing MSA / MAS / AMAS Hyper-Dimensional data files. Althou…
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Hi,
first of all, thank you for this great piece of software!
It works good for most of my fluorescence microscopy images, but in some cases it fails to align the images of my z-stack properly. For …
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Is there a way to reset the BigDataViewer view to the original orientation? If the user accidentally alters the orientation by rotating the view then it's really difficult to manually get it back agai…