-
To do:
- [x] make sure runs and gives the correct output
- [x] add fix for SED-ML files with missing `xlmns:sbml` attributes
- [x] add column that records whether `xlmns:sbml` attribute is missing…
-
References inserted in the new MS Word (365) using the new Mendeley Cite plugin do not appear to be extractable.
Here's a test file made on Mac OS 11.5.2, Word 16.52, Mendeley Cite 1.33.2
[test_ref.…
-
## Your Environment
* Platform [PC desktop, Mac, iOS, Office on the web]: PC desktop
* Host [Excel, Word, PowerPoint, etc.]: Excel
* Office version number: 2210 (Build 15726.20202 Click-to-Run)
…
-
---
id: vcell
version: 7.5.0.86-dev0
specificationsUrl: https://github.com/virtualcell/vcell/releases/download/7.5.0.86-dev0/biosimulators.json
specificationsPatch:
version: 7.5.0.86-dev0
im…
-
### Contact Details
_No response_
### Location
runBiosimulations
### What happened?
When running the attached SED-ML file, biosimulations claims there's an error:
```
target /sbml:s…
-
Biosimulators requires an omex file as input, but it does not seem to accept the omex files we created. Why are the omex files not accepted? To figure out why, create a 'minimal' omex file that has th…
-
Goal: reduce the frequency of little alerts.
There's got to be a reason for outages of a few minutes
-
Try to separate the commits of https://github.com/OpenSourceBrain/SBMLShowcase/pull/18 into a clean "minimal omex" related PR, and other unrelated stuff
-
[create_omex](https://github.com/robertvi/SBMLShowcase/blob/2c38d1abe0542196ed51e45f3e1f24b4c73e2e1e/utils/__init__.py#L44) function has some [hardcoded bits](https://github.com/robertvi/SBMLShowcase/…
-
# Issue
Currently, in `L1V3` it is not defined out the output results should be stored.
We need a way to store `outputs` in Files/Combine Archives. I.e. it is not sufficient to define the output, bu…