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## Short description of the problem
Can't visualise the pangenome with average nucleotide identity, even when ANI is imported.
## anvi'o version
Keep the header of this section, but replace …
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Hello there,
I want to build a pangenome for a genus of grasses (_Hordeum_) I am working on in order to do some analysis. I have been playing with `pggb` for a while now but I think is time to requ…
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Hi there,
As part of a pangenomics-based workflow, I have whole-genome kff files for each sample. (Probably important, this does *not* include kff files for each transcriptome).
Is it possible t…
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Greetings, and thanks for this work.
The chromosome graphs for minigraph-cactus are available both in `.vg` and `.og` format, but as far as I know, only the `.og` version is the full, non-clipped, …
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Dear,
I would like to look at synteny for a pangenome I constructed for different representatives of the Lactiplantibacillus plantarum species,
since I saw the function anvi-analyze synteny exi…
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Hi Team,
I noticed that there is a huge differences between rmsk.bigBed and GCF_009914755.1_T2T-CHM13v2.0_rm.out as shown below:
5,586,304 rmsk.bed (converted from rmsk.bigBed using bigBedTob…
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# Large Dataset Notary Application
To apply for DataCap to onboard your dataset to Filecoin, please fill out the following.
## Core Information
![image](https://user-images.githubusercontent.co…
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# Large Dataset Notary Application
To apply for DataCap to onboard your dataset to Filecoin, please fill out the following.
## Core Information
![image](https://user-images.githubusercontent.co…
-
# Large Dataset Notary Application
To apply for DataCap to onboard your dataset to Filecoin, please fill out the following.
## Core Information
![image](https://user-images.githubusercontent.co…
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When working with both HPRC Minigraph graphs and MC graphs, converted into .og locally (see below), I have encountered a problem where any GRCh38 coordinates processed with odgi pav are reported as no…