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1. pick two voxels
2. write a function that can get the covariance of these voxels
3. this function will eventually be used to get covariance parcellation-wise across the array
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When looking at the Schaefer 200 parcellation here in neuroparc, and comparing it to the [canonical parcellation](https://github.com/ThomasYeoLab/CBIG/tree/master/stable_projects/brain_parcellation/Sc…
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When I want to classify the hcp task-based dataset, I need some specific region, like below:
Gambling Punish--region:Striatum; MMP code:361, 362; Prediction:--
Could you please explain me what's the…
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Dear Sebenius,
I apologize for any inconvenience caused by reaching out to you. I am currently encountering an issue with retrieving cortical thickness values for each vertex within every brain regio…
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I noticed that calling `siibra.get_map` with an invalid space argument does not raise an exception, but returns None. For example, the following line `siibra.get_map(parcellation="3.0.3", space="banan…
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### Expected situation
I attempted to parcellate an object using the Schaefer dataset as per the bottom of this walkthrough:
https://netneurolab.github.io/neuromaps/user_guide/transformations.html
…
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Hi,
After I downloaded the latest commit (on June 6, 2014), ConnectomeMapper is failing at the Parcellation stage because it cannot find csf_mask.nii.gz.This file does not exist, and it was not requir…
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v18 (has the current hierarchy of the brain areas stated in the "ontology" JSON):
Amunts, K., Eickhoff, S. B., Caspers, S., Bludau, S., & Mohlberg, H. (2019). Whole-brain parcellation of the JuBrain …
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DCANBOLDProc is not creating ptseries (any of them - the only output file is the dtseries) output files for analysis. this prevents the use of file_mapper.sh.
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Hi,
I found the affiliation very strange, and different from https://github.com/PennLINC/xcpEngine/blob/master/atlas/schaefer200x7/schaefer200x7CommunityAffiliation.1D
Similar difference also e…