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Hi Paola,
As discussed in our last meeting, ArrayExpress and Expression Atlas curation team is proposing some changes to the 10x library construction EFO branch.
1) As we discussed, using the te…
anjaf updated
3 years ago
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I don't seem to have permissions to install nextflow within the lifebit/cloudos
```
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
ERROR conda.core.link:_ex…
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This paper did a nice job of showing how stringtie, plus orf finding, revealed a lot of good hits to unannotated protein isoforms. https://pubs.acs.org/doi/10.1021/acs.jproteome.8b00295
Combining t…
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when I use the code "python3 -m pip install git+https://github.com:aristoteleo/dynamo-release" to install this software, but the error was rraised as follow.
Collecting git+https://github.com:aristot…
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Docker is running though... below is the full log
```
Command executing: Powershell.exe docker pull smithlab/spritz ;docker run --rm -i -t --name spritz-956943642 -v """Z:\AGS\AGS RNAseq CNIO\raw da…
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I am getting the following error. Can you please help with this
Error executing process > '3_rnaseq_gatk_splitNcigar (rep1)'
Caused by:
Process `3_rnaseq_gatk_splitNcigar (rep1)` terminated wit…
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Hi,
I'm on Linux Mint 18.3 Sylvia (KDE). I tried python 2.7, 3.5, 3.6 all give the same error.
> Traceback (most recent call last):
> File "/media/Linux/Packages/proteogenomics/map_peptide2gen…
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Please comment on the inclusion of the following terms in omics inclusion comparison:
**\*omic(s) matches**
| term | count |
|:--------------------|-------:|
| genomics …
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Hi MSFragger team,
I am running MSFragger open search using MSFragger-2.2 and philosopher build 20190319. I am getting this message in the fragger run: "Not enough data to perform mass calibration,…
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Currently, our focus is fairly narrow: provide a guided tool to facilitate proteogenomics on Windows 10 Anniversary Edition. I'm fine with that narrow vision for my current work. But a bigger vision w…