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Before extracting the radiomics features, I want to use a CNN segmentation model to segment the MRI. But after that, both the mask and image have changed into a series of numpy. Can I directly ext…
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I'm new to pyradiomics and just installed it under MacOS/conda:
$ conda install -y pip
$ pip install pyradiomics
$ python -c 'import radiomics; print(radiomics.__version__)'
2.1.…
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Hi, I have to analyze 45 sets of 3D images. Whenever I run the program I get an error
list assignment index out of range. When I am running only 15 cases it runs fine. Will appreciate any help.
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Hi,
I am trying to calculate a parametric image by extracting voxel-wise features from a square kernel. After reading the reply in this thread: https://groups.google.com/forum/#!topic/pyradiomics/k6W…
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Hi,
I am having an issue reading multiple files by looping over different cases in pyradiomics. I am using following code
`for Case_id in range(1,6):
path = '/Users/abhinandanbatra/Desktop/pyr…
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Hello Radiomics community!
I have some questions regarding to dealing with negative intensity voxels.
I have brain tumor (glioma) MRI data set and it has been normalized relative to white matter…
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Hello,
I'm a beginner at pyRadiomics. I've installed radiomics module in the slicer.
The steps I used for the feature extraction:
Imported the 2D Dicom image (one slice) for the test.
Drew an …
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Hi!
Recently I use the open-source project called pyradiomics, but now I have a very big problem about the mask image. I really hope you can help me solve it!
The problem is the mask file named ma…
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Hi everyone!
Since I am about to begin a radiomic study ex novo, I just wanted to extract images with all filters.
Now
How should I set /examples/exampleSettings/Params.yaml？
# Settings to u…
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I wrote a ‘for’ function for extract radiomics features from different images, but the memory usage rapidly growing when I repeatly invoke 'execute' function. If there exists a memory collection? How…