-
For discussion.
## Trait data issues
**Exclude term matches in references, citations, taxon names**
Many invalid trait data records seem to come from term matches in references or citations o…
-
Acquire taxonomy from http://www.marinespecies.org/
* [ ] Acquire permission to redistribute the taxonomy when integrated into the ALA names lists and index.
* [ ] Retrieve WoRMS taxonomy for Aust…
-
Goal: compare the performance (in terms of accuracy, speed, and RAM usage) of the MinDivLP approach, and a standard QIIME2 workflow.
- [x] Familiarize yourself with [QIIME2](https://qiime2.org/) an…
-
**Describe the problem**:
Issue originally reported on the GBIF feedback portal: https://github.com/gbif/backbone-feedback/issues/263 by @PatrickKennedy2022
Patrick noticed that the following gene…
-
This issue follows up up on my suggestion in https://github.com/ODM2/ODM2DataSharingPortal/issues/71#issuecomment-365718683 that we pick up the "800-lb gorilla" issue to reimagine variables as we desc…
-
CMs met for over 2 hours this week to discuss the 'taxonomy resource' requirements. As development is moving so quickly, I wanted to share the overall outcome as soon as possible. I would be more than…
-
Hi,
Is there any way to rename unknown taxa as unspecified of the last identified taxa?
For example, if I have a sequence identified as "Enterobacteriaceae" (family) but is "NA" (genus), I'd lik…
-
Define clear rules what exactly makes a name the same name. A scientific name in the sense of the Clearinghouse of CoL+ has an identity and a unique, stable identifier. If possible these identifiers s…
-
This dataset contains the hymenoptera family Chrysididae twice:
https://www.checklistbank.org/dataset/33631/names?facet=rank&facet=issue&facet=status&facet=nomStatus&facet=nameType&facet=field&face…
-
I am currently running your pipeline and would like to comment you a few problems I stumbled upon while following the readme.
Under 2. Downloading RESCUE Files:
`tar –xvzf ./databases.tar.gz --> doe…