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```
x jhu-usc.edu_READ.HumanMethylation450.Level_3.7.3.0/jhu-usc.edu_READ.HumanMethylation450.7.lvl-3.TCGA-07-0227-20A-01D-A39G-05.txt
x jhu-usc.edu_READ.HumanMethylation450.Level_3.7.3.0/jhu-usc.edu_…
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目前 phenotype data 条目下还没有看到？ 有在其他地方实现 subtype 的对比分析么？@lishensuo
另外已有 pancancer_conserved_immune_subtype 的数据
tcga_subtypes 的不知道也能否利用
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Hi! Thanks for your great work!
May I ask you a question?
Is the classification task for dataset TCGA-NSCLC still a binary classification task (the same as binary classification task for dataset CAM…
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Hi @RMolania, thank you for developing this elaborate approach to batch correction.
I am currently testing RUV-III on a merged dataset comprising TCGA-KIRC bulk RNA-seq and another study. However, af…
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Am I right in expecting the patch level feature *.pt files (433779 files each containing 256 x 384 tensor) used for pretraining the second stage of HIPT to be present in the `HIPT/3-Self-Supervised-Ev…
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**Title:** Automatically label medical data from diagnosis reports
**Project Lead:** Frank Langbein, frank@langbein.org
**Description:** We wish to automatically label medical diagnosis data (MRI,…
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I want to ask if the patches of TCGA and PAIP will be open sourced so others could compare their methods with yours fairly.
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Hi, could you please share with me the distribution of slides used for training and testing in the TCGA dataset, along with their respective labels?
I noticed that it's mentioned here "We randomly…
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``` r
data("breast.TCGA")
data = list(mrna = breast.TCGA$data.train$mrna, mirna = breast.TCGA$data.train$mirna,
protein = breast.TCGA$data.train$protein)
# set number of variables to s…
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Hi, I'm seeing a parsing error for `brca_tcga_pan_can_atlas_2018`:
`utils::read.table` chokes too easily on malformed files -- is it worth considering switching to readr/vroom or data.table here to…