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Please provide as much information as you can:
* **Suggested term label:**
neutral amino acid, sodium: L-arginine antiporter activityy
* **Definition (free text)**
Enables the transfer of a s…
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We we have an ‘annotation’ in the ‘domain section’ of the gene page which displays the number of transmembrane domains.
This information is from a qualifier in the contig files.
As you can see i…
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The alignments are defined in such a way that it is not possible to have consecutive gaps. Here's a test case (to go in NeedlemanWunschTest. Requires 4bc1d20.):
``` java
@Test
public void testSin…
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## Describe the issue
Missing upstream cHGVS nomenclature for LDLR RefSeq transcript NM_000527.5.
Given variant 19-11200108-A-G, we'd expect a cHGVS nomenclature of c.-117A>G when using the RefSeq…
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Greetings.
Trying to understand VEP a bit better. I am running VEP (version 112, perl 5.26.3) on a Linux server (CentOS) and have manually downloaded indexed cache GRCh38 from [here](https://ftp.en…
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**Describe the bug**
When I used METABOLIC-C.pl , I met some bugs:
This is the **METABOLIC_log.log**:
[2022-10-30 19:50:08] The Prodigal annotation is running...
[2022-10-30 19:50:34] The Prodig…
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We have auto-generated content, including uniprot IDs, papers (dois?), etc.
Need:
- somewhere to put it
- somewhere to populate it
- clear links from landing page
Might use Discourse, or po…
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beav --input shivanshi_bakta_annotation/Plant_Pathogen/Pectobacterium_carotovorum/Pectobacterium_carotovorum.fna --output beav23/ --skip_tiger --bakta_arguments '--db $HOME/Shivanshi/shivanshi_bakta_…
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**Command run:**
```nextflow run -params-file params.yml -c custom.config -profile uppmax /proj/rosling_storage/AMF/b2017181_nobackup/merce/try_RepeatDefeaters/RepeatDefeaters_ccandik```
I tried t…
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I hope I'm not missing something silly here. I'm seeing these two results for the same peptide for two different scans:
```