-
### Please complete the following tasks
- [X] I have searched the [discussions](https://github.com/clap-rs/clap/discussions)
- [X] I have searched the [open](https://github.com/clap-rs/clap/issues…
-
Your visualization is pretty, could you kindly suggest how you infer their parent/child…
-
There are basically two branches of BA.5 it seems - this is one of them.
It has ORF1a:Q556K and is the one that has appeared outside of South Africa, in South Germany and Austria (6 seq total)
[…
-
A sublineage of AY.4 with Orf1a:T4083M seems to grow in some european countries
First sequences : UK 33w/2021
Last sequences Switzerland 45w/2021
Total sequences: 1937 sequences (Europe: 1907)
E…
-
Data Developers - Please use this issue to push new releases if doing so via comment.
# Explainer
- Create an issue comment that starts with `/release` on the first line.
- Second (non-empty) line w…
-
I'm having difficulty with the latest ncov workflow due to the addition of the automatic update of the nextclade dataset in the ["prepare nextclade" rule](https://github.com/nextstrain/ncov/blob/maste…
-
It looks like most of BA.2 in South Africa and Southern Africa in general seems to have nuc:9866C unmutated like the rest of BA.1/3/4/5.
Apparently some nuc:C9866T got lucky through a bottleneck (e…
-
Having a look at lineages that are neither Omicron nor Delta and still circulating in the UK (using open.cov-spectrum.org's Nextclade integration), I came across an interesting B.1.258.3 sub-lineage.
…
-
I'm not sure whether this will happen automatically or not, but so far, you're not calling Omicron as Nextstrain clade 21K but 20B instead.
 by [@AngieHinrichs](https://github.com/AngieHinrichs) which even contains an alternative.
Th…