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Space to brainstorm gene sets to add to our GMT
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**Describe the bug**
Reported diseases or phenotypes from genetic evidence sources are not aligned with the name of disease association page.
**Observed behaviour**
Diseases or phenotypes display…
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Hello,
I would like to understand how I should **interpret the resulting JSON when running Exomiser with a VCF**.
There are two fields that I have doubts about the **priorityResults**: **HIPHIV…
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Cecelia has some code to do this
I envision making 2 new functions - something like "convert_dd_processed" and "convert_ds_processed"
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hasTemporaryId ilxtr-NeuronHuang2017-0-ilxtr-hasExpressionPhenotype-NCBIGene-12308-0-ilxtr-hasExpressionPhenotype-NCBIGene-20604-0-ilxtr-hasInstanceInTaxon-NCBITaxon-10090-0-ilxtr-hasNeurotransmitterP…
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Notes from Google Doc with @smvelasquez
(MV) As I went along I realized that I could add new metagenotypes from scratch or add new phenotypes to an existing metagenotype
(AC 21/03/22) Yes, and it …
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The two data sources are:
1.
https://github.com/beoutbreakprepared/nCoV2019/tree/master/latest_data
2.
https://docs.google.com/spreadsheets/d/e/2PACX-1vQU0SIALScXx8VXDX7yKNKWWPKE1YjFlWc6VTEVSN45Ck…
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**Description**:
The frequency of use (FOU) phenotype for NGC continues to be flipped in the opposite direction from the other NGC phenotypes (OAall and OAexp). See figures in GitHub issue 140 in the…
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### Module Overview
This module aims to find genes predicted to impact a known feature or mechanism of the disease. It requires condition-specific knowledge and access to relevant datasets. The refe…
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Hi,
I have been enjoying FastPG now for some time, clustering up to 8 million cells in one hour or more on my iMAC.
I am now stuck on a new dataset that just will not cluster. Im using the same …