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Hi,
I am trying to generate a pangenome using two genome assemblies of the same species.
I started by running partition_before_pggb, and now I am running the pggb command for each community.
My job…
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Enable share button without having to screenshot my screen, this will be useful if I want to share weather forecast of my location on social media.
Include intro page, this will go a long way in he…
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I've seen a few reports now of various packages, tending to have fairly large dependency trees, where attempts to install the package sometimes cause tpkg to hit the 10000 checked solution limit befor…
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Is strobealign a good basis for the following application:
We would align against a pangenome FASTA. So we might have 100 genomes in this system. Downstream we project the alignments into a graph f…
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# 🖥 Benchmarking `transformers` w/ HF Trainer on a single A100 40GB
We are going to use a special benchmarking tool that will do all the work for us. https://github.com/huggingface/transformers/pul…
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Please describe:
1. What you were trying to do
I am trying to map paired end short reads to a pangenome graph consisting of 11 50Mb genomes. The graph has the following specs after chopping:
…
fbemm updated
3 years ago
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# Pitch
## Summary
This will be a part of my reporting class assignment (I'm a data MS student): I'm working on a story on court reporters. They are the ones typing everything that's said in a c…
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### System information
- **What is the top-level directory of the model you are using**:
tensorflow/models/research/object_detection
- **Have I written custom code (as opposed to using a stock exam…
szm-R updated
3 years ago
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This is a list of metafeatures to be implemented for metafeature experiments and other use. This list will be updated with more specific metafeatures as more research is performed.
### Metafeatures…
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