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https://mp.weixin.qq.com/s/Vx9xmODCiF2nqnlNlpB4Cw
ixxmu updated
2 years ago
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Hi,
I found the paper is very helpful! Thank you!
I'm a user of MAGIC packages. But I was confused about using MAGIC for downstream analysis. Could I use Wilcox to evaluate differentially expressed …
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Hello, I did not report an error when creating the object.It didn't end for a long time, probably several hours.Is this normal?
code:
infercnv_obj = CreateInfercnvObject(raw_counts_matrix=data, anno…
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Hi, I have scTCR fastq and hashtag fastq of 10x Genomics. We don't have scRNA-seq fastq. Can we demultiplex scTCR data?
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https://mp.weixin.qq.com/s/RqBQKaU4kg6wSu7ySJiTPg
ixxmu updated
2 years ago
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https://mp.weixin.qq.com/s/OK4c5GMZIUGD0Zt25ZSULQ
ixxmu updated
2 years ago
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We might want to check this one as the ontology_text says 10X 5' v2 sequencing but the ontology_label says 10X 3' v2 sequencing. One of them may be a typo.
Project Detail Page | project_id | librar…
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Is it possible to use TRUST4 on paired end data with separate index files (as in 10X 5' TCR and BCR sequences)?
Thank you!
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I'm trying to use tracer on some 10x genomics fastq files, and noticed I'd have to demultiplex them to be used.
I found this thread (https://github.com/Teichlab/tracer/issues/58) from a couple yea…
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Hi,
Thank you for providing the Sicelore software. I have been using it to analyze some of my data.
I realized I was losing a lot of reads (60.8%) at the polyA scanning step. Starting with 19,83…