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Hi Xihao,
Thanks for designing such a useful tool. I'm trying to run _STAARpipeline_Gene_Centric_Noncoding.r_ in _Step 3.2: Gene-centric noncoding analysis_in my way, and the error below showed up:…
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An upgraded plant analyzer from RnD would be helpful for a better botany experience. Some things it could possibly do is (in order of importance)
-Tell exactly how much food and water the plant takes…
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Hi,I got a error **"grep: (standard input): binary file matches
Exit: Read pairs extensions not defined. Exit“** when i start running hic-pro,
###**1,the organization of my data :**
![image](https…
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Concrete ML simplifies the use of FHE for data scientists to help them automatically turn machine learning models into their homomorphic equivalent. FHE can be particularly useful to protect users hea…
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We are planning to use the Twist protocol to do targeted ONT sequencing. The protocol includes an enzymatic conversion step to convert all unmethylated Cs to Ts, so the analysis will be similar to Ill…
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https://github.com/InformaticsGenomicMedicine/DraftCoreDataModel/blob/79450932a44ee677816f9c02e6f5660ea03e5ec1/src/core_variant.py#L145C24-L165
This method needs to be more flexible. Please:
1. Ad…
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I'm trying to evaluate the effect of my mpileup changes on multi-sample calling. I have a single sample evaluation which just compares a call VCF against a truth/benchmark VCF, so I thought I'd take …
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The `_open_for_reading` function puts opened FastaFile objects in a memoize cache. These FastaFile objects have open file handles that are not thread safe. This causes issues in applications that use …
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Implement the biomarker search API
* init service
* Simple search categories
* BEST Biomarker Role
* Advanced search
* Specimen
* LOINC code
* Assessed entity type
* Biomarke…
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## install vcftools
Determine the best way to install [vcftools](https://vcftools.github.io/man_latest.html)
The steps below compile it from source, is there a pre-built binary executable?
…