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Hi, firstly thank you for creating the nabseq_nf pipeline.
I've been running the nabseq pipeline on Seqera/Tower and noticed that the biggest bottleneck is the `subset_aligned_reads ` step, which f…
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The following generated xml triggers an xml Exception when the package is installed in AEM:
```
keywords=\"[Automation,mRNA,Precision & Genomic Medicine,Monoclonal Antibodies]\" topics=\"Automation,…
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When visualizing different datasets (eg cell entry and antibody escape) on the same structure, it seems that the `Floor` effect coloring is sometimes carried over stochastically even though it is not …
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Hello! Thank you for the interesting paper. I have a few questions regarding the code and datasets used in your experiments.
I noticed that the notebooks available are for training the models and p…
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New term request Neutralizing anti-rabies virus antibodies in blood (samant_110131003343):
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### Project short name:
ChimerismKidneyTransplantReject
### Primary Wrangler:
Ida
### Secondary Wrangler:
@arschat
### Link to Ingest
* https://contribute.data.humancellatlas.org/projects/detai…
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[tf_env.txt](https://github.com/keras-team/keras/files/11970574/tf_env.txt)
You can obtain the TensorFlow version with:
python -c "import tensorflow as tf; print(tf.version.GIT_VERSION, tf.ver…
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Ellen Quardokus
This RRID number AB_10563656 shows up twice, but for two different antibodies: Anti-LYVE1 antibody [EPR21857 and HLA-DR antibody [EPR3692]. Only the HLA-DR antibody [EPR3692] entry is…
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It seems that our parsing method doesn't do a good job splitting antigens and fluorophores. Things seem to fall apart with a long tail of research and custom samples (Kappa and Lambda are funny, don'…
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Hi Brennan (and other OPIGlets working on this),
Great tool! Couple of topics for you :)
1. Batch infererence
I just noted that in the publication you're using a bsz of 64 for training, and I'…