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From tony:
Now that db-xrefs.yaml/json is in production, there is a small issue
that I think needs to be taken care of, concerning the use of
BET:0000000 as an entity_type.
BET:0000000 is used as th…
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From the 2023-10-12 Reactome2GO NYU meeting:
When a black box reaction with a corresponding GO BP exists, remove the intervening Molecular Event between that BP and the upstream MF.
The upstream…
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Dear all,
The proposal has been made to obsolete
* GO:0009373 regulation of transcription by pheromones
* * GO:0045996 negative regulation of transcription by pheromones
* * GO:0009371 positi…
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We want to do this to allow using MEROPs (and perhaps other resources) as evidence for IKR annotations.
Specific example from @sjm41
> In that example:
Entity: A1ZBU9 (CG13423/FBgn0034513)
…
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In some cases, when searching for identifiers in GO-CAMs on Google, toaster is revealed as a secondary hit, rather than having the appropriate name.
For example, as of this writing, `R-HSA-9686347` d…
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Hi everyone,
@tonysawfordebi would like to get a definitive answer from the curators regarding the addition of new qualifier terms that @dosumis proposed at the LA meeting. He is interested in kno…
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I noticed recently when evaluating linkouts for PomBas that although AmiGo has
link outs from PubMed, it does not have linkouts from ePMC (although GOA does)
eg.
EuropePMC http://europepmc.o…
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Hello Ontobio team,
I have a simple RDF Turtle file `test.ttl` that I want to load using Ontobio:
```
@prefix skos: .
@prefix owl: .
@prefix rdfs: .
@prefix xsd: .
a owl:Class ;
…
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If we are on this page e.g. http://browser.planteome.org/amigo/term/ECO:0000363 there is an option to link to all annotations associated with this ECO in the 'related' section. The links should provid…
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from #2137 / #1134
I think these are important, but I think they can also come afterwards