-
As you might have seen, one of the [vignette](https://easystats.github.io/bayestestR/articles/3_IndicesExistenceComparison.html) is a bit more detailed and looks almost like a paper. Actually, the who…
-
Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/pmoulos/metaseqR2
Confirm the following by editin…
-
This is a very nice tool. I'm trying to use it. However, upon issuing the command "sh pipeline_ref_plus.sh", under the "discovery_REF-minus" dir, I got: Chimp list does not exist. Generating...
Error…
-
I got the amr of each sample using amrfinder. First, I do not know the meaning of the 4th column in the output bed file. Secondly, because I have many samples in groups, how could I get the common am…
-
I work with single-cell sequencing technologies, and have been troubleshooting using HoneyBADGER on some of my pancreatic adenocarcinoma scRNA data (generated using 10x genomics chemistry and an illum…
-
Hi @bramvds,
I found an extreme case where binarization fails. In my case I had 1 regulon with 1 gene which raised the following error:
```
TypeError Traceback (mo…
-
I could successfully run bModelTest on example dataset obtained from https://github.com/taming-the-beast/Substitution-model-averaging/raw/master/data/primate-mtDNA.nex, however when I ran that using m…
-
When running the particle filter code with probabilities that can generate -Inf log_weights, repeated running eventually appears to produce NaN values. Calling Gen.sample_unweighted_traces() then fai…
-
# Summary
Interpreter shows the wrong line number:
# Steps to reproduce
Here's a function:
```
def exponential_smoothing(x, present_weight):
''' Compute an exponential smooth of a data s…
-
**Submitting author:** @justinalsing (Justin Alsing)
**Repository:** https://github.com/justinalsing/dlmmc
**Version:** 1.1
**Editor:** @danielskatz
**Reviewer:** @Chilipp, @taqtiqa-mark
**Archive:** …