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Hello ! I'm still new to learning on proteins and I was wondering how to train on the Structure Similarity Task (at least in an efficient manner) when using the graph format for PyTorch Geometric.
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## Filling an *a priori* known `FECrsGraph`
Tagging @csiefer2 as the package owner
Hi,
I have a performance question regarding the fill of a precomputed `FECrsGraph`. I have precomputed all th…
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From #1071
@krlmlr I am missing some context (maybe it'll come once I read the whole thread but I am writing down items for now)
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## Background
Small repeats in the assembly graph can hamper the genome assembly. However, in some cases when we have prior knowledge of the target, e.g. the plastome structure, we may have the res…
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All of these should be replaced by proper references using the `:ref:` Sphinx role, or, for most links to the reference manual, using `:mod:`, `:func:`, :class:` etc.
When there is no label that ca…
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The sphinx domain allows for generating PLC project API documentation directly from the source code. Currently, it's pretty limited - the proof-of-concept from #12 is now in master.
A simple examp…
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> Overall, though, I see this as an area where a client library can and should step up to the plate: in ~30 lines of JavaScript code, for example, I can (generically) parse a FHIR JSON bundle into an …
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Jupyter notebook cells can produce text output that is specific to markdown (`text/markdown`). It'd be useful if MyST could parse this output along with the rest of the markdown in the notebook. This …
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## Description
As of version 2.13 of Opensearch, whenever a segment is created we create the data structures which are required to do vector search(aka graphs for HNSW algorithm, buckets for IVF algo…
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# Disclaimer
Maybe this is tricky to implement, or maybe it's already been posted somewhere, but the only resource I've found on this is (ironically) a stack overflow [post](https://stackoverflow.com…