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All the dependencies are installed. but, Sc2rf generates problem shown in picture
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### Ask away!
Hello!
[nextflow.log](https://github.com/epi2me-labs/wf-human-variation/files/14007577/nextflow.log)
Human-variation-workflow has stopped with an error exit status(137)
I guess i…
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### Operating System
Other Linux (please specify below)
### Other Linux
Ubuntu
### Workflow Version
2.0.0
### Workflow Execution
Command line
### EPI2ME Version
_No response_
### CLI command…
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Is there a way to convert `allvalidpairs` file to `pairs` file. Actually I need to do some analysis for which I need `pairs` files but I only have `allvalidpairs` files.
Best Regards
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Hi @kirilenkobm @MichaelHiller,
I `wget` [https://github.com/hillerlab/make_lastz_chains/archive/refs/heads/main.zip](https://nam11.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2F…
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The Nextflow website is around 5 years old and we think it needs a bit of a polish up.
We are looking to redesign it and want input from the community.
Some initial ideas include:
* A more mode…
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Hi!
I have recently listened to an ESHG talk about annotating variants in 5'UTR. I found it very interesting and it is worth trying. Below you can find their GitHub page and publications.
[https…
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### Description of the bug
Bug 1: The included nanopolish doesn't included the required HDF5 plugins or VBZ file.
To rerproduce:
When creating a a fresh, base environment and minimal working exa…
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Update cutadapt task in `prep_riboviz.nf` to use `-j ${params.num_processes}` rather than `-j 0` so the number of processes to be used can be explicitly specified.
As `num_processes` applies to oth…